CDS

Accession Number TCMCG057C53450
gbkey CDS
Protein Id XP_018459274.1
Location complement(join(81171..81597,81599..82320))
Gene LOC108830171
GeneID 108830171
Organism Raphanus sativus

Protein

Length 383aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603772.1
Definition PREDICTED: LOW QUALITY PROTEIN: branchpoint-bridging protein-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor 1 helix-hairpin domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCCGTCGAATTGAATCCTTCTTCTCATCCCCTCGATCAACCTGGTGACGACAAGAACCAATCCGAGGACACCACAATCCATAGGAAGCGTCGGAGCAGGTGGGCTGACGACGAGCCGAAGCCGACGATTCAGCTGCCCGATTACATCAAGGAGATTCAGGTTTTGAACAGCAGGCTGCTTGATATCAGTAGGCTGCTTGAGTCCGGTATGGCTTTGGATGATAGACCCGAGGGGCAGAGGTCGGCTTCGCCAGAGCCCGTGTATGATAACATGGGGATTAGGATCAACACTAGGGAGTACAGAGCGAGGGAGAGGTTGAATAGAGAGAGGCAGGAGATTATATCTCAGATTATTAAAAAGAATCCTTCTTTTAAACCTCCCGCGGATTACAGGCCTCCCAAGCTCCACAAGAAGCTCTTCATCCCGATGAAGGATTATCCCGGTTATGATTTCATTGGTCTTATTATTGGTCCCAGGGGGAATACTCAGAAGAGGATGGAGAGGGAGACTGGTGCTAAGATTTTGATTAGGGGTAAAGGGTCTATGAAAGAAGGGAGGCTGGATATGAAGTACGACCCTGCTGAAAATGAGGATTTGCATGTTTTGGTTGAGGCTGAGACTCTGGAGGCACTTGAAGCTGCTGCTGGTATGGTTGAGAAGCTTCTTCAGCCTGTTGATGAGGTGTTGAACGAACACAAGAGGCAACAGCTGAGGGACGGAACTAGAAGGGATGAAGATTTCTGTAGGCTGTGTGGTGAGCCTGGGCATAGGCAGTTCGCGTGTCCATCTCGTTTGAATACCTTTAAAAGTGATGTGCTTTGCAAGATTTGTGGCGATGGTGGACACCCTACTATTGATTGCCCCGTGAAGGATACTAATGGGAAGAAAATGGATGACGAATATCATAACTTTTTGGCTGAGTTAGGAGGAAATCTCCCTGAATCTTCTCTCAAACAGAGTACTAATACTTTGGCTCTTGGACCGGGAAGTAATCCTCCATGGGCTAGCAATGGGGGCAGTGGGGCAAGTGCGCATCCTGGCTTAGGGTCAAATCCAGCCAAACCCTCCAAAGAATATGATGAAAAAAATCCAGATGGCCAATTCGGCGATACAGGCAATGAATGGTTATCGGTTAGAAGGTAA
Protein:  
MDSVELNPSSHPLDQPGDDKNQSEDTTIHRKRRSRWADDEPKPTIQLPDYIKEIQVLNSRLLDISRLLESGMALDDRPEGQRSASPEPVYDNMGIRINTREYRARERLNRERQEIISQIIKKNPSFKPPADYRPPKLHKKLFIPMKDYPGYDFIGLIIGPRGNTQKRMERETGAKILIRGKGSMKEGRLDMKYDPAENEDLHVLVEAETLEALEAAAGMVEKLLQPVDEVLNEHKRQQLREXGTRRDEDFCRLCGEPGHRQFACPSRLNTFKSDVLCKICGDGGHPTIDCPVKDTNGKKMDDEYHNFLAELGGNLPESSLKQSTNTLALGPGSNPPWASNGGSGASAHPGLGSNPAKPSKEYDEKNPDGQFGDTGNEWLSVRR